You can post to your blog via email!

If successful, this marks my first post submitted via email. On
Friday, I leave for Kafue National Park, Zambia, where I will be
monitoring baboons for a six-week period. Chances for electricity and
internet are slim. Possible, but slim so it is probably reasonable to
assume that I will be out of contact for the duration of the trip.
Nevertheless, you can never be too prepared. In case I do encounter
internet, I will do my best to post my notes and observations from
baboon camp. I learned recently a nifty trick for posting to my blog
via email. This is my fourth attempt to get it to work. Did it?

Yes!

Thanks to WordPress: http://codex.wordpress.org/Post_to_your_blog_using_email

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You can learn a lot from a cab driver

One of the perks of being a graduate student is the ability to claim to your non-student friends and family that you are both employed and on vacation two full weeks into January. Of course, vacation is a subjective term–the work never really subsides and will surely pile up if neglected. Still, it all beats working in an office (ironically, I write this sentence from my office), which is why it is tactful to shut your mouth and act busy this time of year.

Winter break is also a great opportunity to escape the ivory tower and speak to people who have not been self-selected to have any interest in your research. While this can result in awkward and humbling situations, my recent experience has instead been extremely positive and has affirmed for me my impression that lay listeners are actually very interested in the kinds of questions that we pursue as primatologists. Among my favorite questions recently posed to me: “Are monkeys smart enough to take over the world?” (maybe).

As a New Yorker, I naively assumed upon moving to St. Louis that I would be able to get by just by walking and taking public transport. One semester later, finding a car has made it to the top of my winter agenda. It was riding a taxi on my way to a car dealership that I had my most memorable anthropology discussion yet. After the driver found out that I was an anthropology student, instead of the customary “you do what?” followed by uneasy silence, his eyes lit up and he proceeded to recount to me emphatically his opinions about Margaret Meade, the Leakey family, and Piltdown man, among others.

At first taken aback by all this, I found myself delighted first, to find myself in the presence of somebody so interested in what we do as anthropologists and second, that I was being viewed, perhaps opportunistically, as a source of information on inquiries such as “Why are chimpanzees so goddamn strong?” and “Why are Samoans gigantic people?”

Eventually, we made our way to the topic of baboons. Did I know, he asked, about the leopard who, when confronted with a baboon infant bundled within her fresh kill, took it upon herself to care for the infant? Was this not proof of a morality not so different from our own? Not having heard of this, I told him it was not possible, a leopard encountering a baby baboon eats the baboon. To not do so is against her nature, will not happen, cannot happen.

The cab driver seemed sure about this and we agreed that it was worth researching with a simple YouTube query. What we did not agree was that the best course of action was for him to whip out a half-broken touch screen cell phone and perform the search with his eyes mostly on the screen. An uneasy minute passed before the “a-ha!” I watched what he handed me (he watched the road):

After all my cynicism, my certainty, I was wrong and my friend the cab driver was right. I have had over a week to digest the video and it is still as shocking as it was the day I first watched it. Shocking not because the behavior surprised me, but because I think that it shows an important point about what we do as behavioral scientists. However we construct our models, however we evaluate our hypotheses, we cannot ignore that our subjects are unique individuals with unique personal histories and chance encounters are continually occurring that can shake up our opinions and perspectives. As scientists, it is our charge to be skeptical, systematic, objective (and even more so when listening to colored commentary such as in this video). As observers of nature, however, telling the story of the lives and interactions of our animals might be just as important of a responsibility. Emerging from this may be the occasional offbeat story that might just blow our minds away.

As the taxi driver dropped me off at the car dealership, he thanked me for the conversation and told me, in a cryptic tone: “You can learn a lot from a cab driver.”

I think so.

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Advisor at Work

For those of you visiting this site for the Tiputini and Ecuador-related posts, be sure to check out the Scientist at Work blog at the New York Times, where Anthony Di Fiore, my undergraduate advisor, is now contributing. I was so excited to see that he is blogging — should be great stuff! His first entry here . . . And some of his older notes from the field.

It seems that Meredith Small over at the Anthropology of Everyday Life feels similarly, she was his undergraduate advisor!

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A Christmas update

I am writing these sentences from the Lambert International Airport in St. Louis, a small while after witnessing a pilot buy breakfast for everybody in sight at the airport Dunkin Donuts. It’s truly Christmas Eve at the airport terminal and the perfect opportunity to update my egregiously neglected blog. For those who noticed the lack of recent activity, sorry! For everybody else, picture four months or so of deeply rich and insightful blog entries from my first semester of graduate school and stay the hell away from the archives.

Did my last entry really come before the semester even began? The last few months have rocketed by. It is difficult to encapsulate an entire semester in a short summary and boring to regurgitate detail after detail. To spare you the information (and myself the effort) here is a short sample of thoughts and events from Fall 2010.

It’s been an eventful semester in the anthropology world, with a few stories widely discussed by mainstream news sources and the blogosphere. Most recently, analyses of ancient DNA from the “Denislovans,” the most recently described archaic hominin lineage and the first to be designated  principally on the basis of genetic evidence, found 4-6% contribution of Denislovan DNA to modern-day Melanesians. For those who follow this sort of thing, this is from the same German team that sequenced the first Neanderthal genome and found some Neanderthal genetic contribution to modern-day humans. I will reserve judgment until I peruse their paper (published in Nature, doi: 10.1038/nature09710), but this “archaic contribution” finding is looking to be a theme early on as we begin to turn up more and more sequence data from early hominins.

In other news, the American Anthropological Association (AAA) leadership recently opted to remove references to “science” from their mission statement in a stated objective to cast the field of anthropology in a broader and more “public” light. Perhaps predictably, this story erupted and unearthed old questions about the meaning of anthropology and the meaning of science. Given some time to digest this news, I think that reaction to this story was probably overhyped. The AAA leadership are probably not (I hope so, at least) “anti-science” and their actions probably followed the recognition that, while some anthropology is deeply tied to science, not all anthropology is. While the logic behind their actions is debatable–and I certainly have my reservations about it–I think that this should (and will) act as a wake-up call to both sides of the argument to reexamine their work and how it relates to the unified discipline of anthropology. Expect to see a greater presence of physical anthropology and other science-minded anthropological disciplines next year, when the AAAs meet again.

This one received less press, but I was excited to see the first published paper (published in American Naturalist, doi: 10.1086/657443) from a unique partnership of primatologists involved in long-term (22-45 years) behavioral studies involving seven primate species. Life history data from all studies were pooled into a single comparative database and analyzed. This is an exciting wealth of data and I hope to see this approach applied in the near future to a greater number of species and topics.

On a very unrelated note, here’s a collection of illustrations that I drew up during a week of persistent internet connectivity issues (evidence of desperation in a PhD student left with a working computer and no work to do). Enjoy! Call for boarding now. Enjoy your holidays, everybody!

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8 tools no graduate student should go without

My first class in graduate school begins tomorrow, so I will keep this brief. I wanted, however, to quickly share 8 tools that I cannot live without and that  I can only imagine will make life easier for not only graduate students, but also undergraduates, professionals, and virtually anybody else who engages in collaborations, is interested in academic discourse, or makes frugal choices in his or her daily life. This is by no means a “Top 10” list–in fact, I like to constantly keep my ears open for better alternatives to even my most-used and favorite tools–but it is a list from the heart! Please add your own favorite tools or alternatives to the ones listed here in the comments.

1. Reference manager

This is the only category where I won’t advocate any single application because there is a wealth of superb reference managing software out there, many of them offering variations of the same features. Each has its strength and weaknesses and I find that certain combinations of reference managing softwares can nicely complement each other. I am currently using a combination of Papers (Mekentosj) and EndNote (Thomson Reuters). Papers is a commercial application for Mac OS (sorry Windows users, see alternatives!) that combines a superb user interface with some nice features. Think iTunes but with PDFs instead of mp3s. You can, for example, set an area of your hard drive for Papers to automatically sort and rename your PDFs according to rules that you stipulate. Papers also comes packaged with a number of common academic search engines such as Google Scholar, PubMed, Web of Science, and JSTOR in which you can search and download files to automatically add to your Papers library. References can be exported in a number of different formats, including BibTeX, CSV, and EndNote. Like in iTunes, managing metadata associated with the PDFs can take a bit of work, but I am betting that starting grad school with an organized database of papers and references (currently at 1,012) will be an enormous asset later on. Papers costs $42 to use, but proof of studentship can drop the price down to $25.

EndNote is a little less user-friendly than Papers, but is absolutely worth getting to know and provides a lot of the same functionality as Papers (but lacks, in my opinion, the superb interface). The key function that EndNote provides (and Papers doesn’t) is the cite-while-you-write capability. As a plugin within Microsoft Word, EndNote serves as a bibliographic manager and can automatically update in-text citations and works cited. EndNote can be quite expensive, but is available through many universities with an institutional license.

Also check out Mendeley (available for Mac OS, Windows, and Linux) as a free alternative to Papers. Other popular reference managers include RefWorks and Zotero (a Firefox extension).

2. Google Reader

As an undergraduate, I remember being overwhelmed by how my professors and TAs managed to always seem so in touch with the latest research in their fields. Much of it probably has to do with word of mouth and extensive journal subscriptions but now, with the increasing digitalization of academic media, there is a way for anybody to easily receive updates through the RSS feeds of their favorite publications. RSS, which stands for “really simple syndication,” is an abbreviated form of updated works provided by a website. Virtually all academic journals that publish online contain RSS feeds which can deliver new articles (or media) directly to an RSS reader. Different browsers deal with RSS in different ways; as RSS readers go, however, I find that none match up to Google Reader. Within Google Reader, you can subscribe to all of your favorite journals and receive summaries of news stories and articles as they are published online. Since many journals publish online in advance of print publication, that means you can keep track of recent work in your discipline before it is circulated in print! Google Reader also lets you share and comment on your favorite feeds with your friends or colleagues. Aside from journal articles, I subscribe to a number of research and technology blogs as well as news sites.

3. Mediafire/drop.io

Here are two indispensable tools for collaborators. Mediafire and drop.io both make uploading large files incredibly simple. Best of all, neither site requires a registration. Mediafire allows visitors to upload files (up to 200 Mb total) with little more than a single click of a button. After uploading, you are automatically provided with a link to your files and options for sharing your uploaded files. drop.io allows visitors to create an online dropbox (with a fancy URL of your choice in the format of drop.io/…). After creating a drop, drop.io provides options to upload files and provides administrative options to restrict or grant access to particular files. Drops are limited to 100 Mb.

4. Academic Earth

In graduate school, taking coursework without a strategic reason is rare and largely discouraged. If you need to expose yourself to material covered in undergraduate introductory classes in order to pursue a certain research topic, chances are that you will have to learn it on your own. But no longer. Academic Earth is a project that makes university lectures by a number of participating universities (see them here) freely available in video format. The project is still young and the topics covered are not exhaustive but it will only improve as more faculty and institutions participate.

5. Chegg.com

Textbooks are expensive and the value of used textbooks can be a tiny fraction of the cost of new ones. In these cases, textbook rental may be a viable alternative. Chegg.com provides exactly that service, allowing students to rent textbooks, use them for a semester, and then return them. Shipping is extremely fast and they will even cover your return shipping costs.

6. Groupon

Groupon is a free coupon service that provides one deal per day in your local area, letting you occasionally crawl out of your office or lab and enjoy your city, usually at a ridiculous discount. Daily deals can be sent to your email and can be redeemed by printing them out or showing them on your mobile phone.

7. Mint.com

Mint.com is a free budget and finance managing website that imports data from your various bank accounts, credit cards, and other sources to provide you with an up-to-date look at your finances, along with custom suggestions for adhering to your specified budget. Once you get past the horror of seeing how little you own, it is an extremely simple and useful tool for understanding your entire financial picture. For security, Mint.com indexes none of your private information and cannot be used to transfer funds. Read more about its privacy policies here (link).

8. Supercook

Just as Mint.com offers a quick look at my finances, Supercook gives me a quick look at my refrigerator. Unlike other recipe websites, Supercook provides recipe suggestions based on what you have in your refrigerator. For me that is much more useful as it provides a means of using up the food I already have and not ending up with a ridiculous surplus of, say, parsley (don’t ever buy fresh parsley, by the way, just because a recipe requires it). You can prioritize or restrict certain ingredients and a suggestion cloud gives you a quick look at what you may need to buy in order to start working on a wealth of other recipes. Recipes found on Supercook are imported from around the web.

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